DNA Polymerase IV (Family Y)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-170
VAL-171
7.3
7.3
14.8
-8.4
29.8
28.1
74.3
VAL-171
LYS-172
8.8
8.9
1.4
2.7
102.6
97.0
45.1
LYS-172
ARG-173
12.2
12.3
-7.5
6.1
65.4
68.2
22.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-231
GLU-232
14.6
14.4
5.0
-9.2
128.9
126.0
105.9
GLU-232
TYR-233
15.7
15.4
16.8
-15.5
141.8
144.9
-36.2
TYR-233
ASN-234
12.6
12.3
-0.8
-3.1
75.1
80.9
8.8
ASN-234
GLU-235
12.6
12.2
-20.2
26.5
28.3
26.2
-78.1
GLU-235
PRO-236
9.8
9.6
11.9
-5.2
83.4
83.8
49.3
PRO-236
ILE-237
10.1
9.7
-1.0
-0.5
73.2
72.8
-35.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees