Atp Synthase Beta Chain, Mitochondrial

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-128   THR-129  8.6 4.5 74.5 -55.5 85.8 41.7 74.8
 GLU-132   ILE-133  6.3 6.2 57.5 -49.4 36.3 47.2 50.2
 ILE-133   LEU-134  8.1 7.9 3.9 -8.1 42.1 44.8 37.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-150   GLY-151  5.5 4.8 -32.8 13.2 89.6 77.3 21.5
 GLY-151   LYS-152  1.8 1.5 -2.6 -4.8 19.3 11.0 34.1
 LYS-152   ILE-153  1.3 2.0 16.3 -9.1 104.4 93.9 1.3
 ILE-153   GLY-154  2.9 3.4 -15.8 39.1 28.6 28.5 -108.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-171   ASN-172  10.7 11.2 9.7 -5.2 86.6 87.7 26.1
 ASN-172   ASN-173  14.3 14.8 -16.8 30.7 154.9 157.2 57.2
 ASN-173   ILE-174  14.9 15.4 11.6 5.2 55.5 57.3 76.1
 ILE-174   ALA-175  12.5 13.8 148.8 -122.5 103.5 111.4 90.9
 ALA-175   LYS-176  13.2 17.2 110.0 -93.3 81.0 38.7 125.0
 LYS-176   ALA-177  17.0 18.2 -87.9 29.9 166.5 137.2 -317.0
 ALA-177   HIS-178  16.9 17.3 -60.8 9.4 112.6 87.8 -45.4
 HIS-178   GLY-179  14.9 15.1 -130.4 -135.4 74.6 34.7 -258.8
 GLY-179   GLY-180  17.4 17.0 -51.5 -169.6 68.6 30.3 -546.9
 GLY-180   PHE-181  15.9 15.1 166.0 28.4 169.7 139.7 882.5
 PHE-181   SER-182  14.7 14.1 -10.8 -21.6 77.4 77.6 33.2
 SER-182   VAL-183  11.6 10.9 -6.4 12.1 43.3 43.5 -9.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-185   GLY-186  5.6 5.5 -3.8 -4.8 120.7 121.7 8.6
 GLY-186   VAL-187  3.3 3.2 -14.1 30.0 104.4 110.8 22.5
 VAL-187   GLY-188  4.4 4.6 1.7 7.7 57.7 45.5 141.2
 GLY-188   GLU-189  5.0 4.4 13.1 43.5 78.8 78.8 90.1
 GLU-189   ARG-190  2.4 1.2 -66.7 5.0 154.1 160.6 -357.2
 ARG-190   THR-191  2.1 1.1 4.3 -3.4 83.3 70.0 57.7
 THR-191   ARG-192  2.3 2.9 -6.7 13.7 93.4 95.3 -31.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-217   VAL-218  10.7 10.4 -1.0 2.8 109.1 110.9 15.0
 VAL-218   PHE-219  9.4 9.4 -5.9 16.0 119.8 119.8 38.5
 PHE-219   GLY-220  7.1 7.1 -15.2 43.5 116.0 109.6 37.8
 GLY-220   GLN-221  7.1 7.1 24.4 6.9 76.9 54.3 77.6
 GLN-221   MET-222  4.0 4.9 -31.9 18.4 120.3 107.3 -47.4
 MET-222   ASN-223  5.2 4.9 -40.1 -0.4 161.2 137.8 -172.6
 ASN-223   GLU-224  5.4 6.4 31.9 -8.3 94.2 99.6 58.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-254   ILE-255  4.0 3.6 -8.0 5.8 133.1 127.0 -4.5
 ILE-255   ASP-256  1.9 2.0 -15.5 7.7 117.0 116.1 51.8
 ASP-256   ASN-257  0.8 1.0 -3.6 6.9 141.2 144.2 -59.4
 ASN-257   ILE-258  3.6 3.9 4.7 8.4 107.8 110.5 25.0
 ILE-258   PHE-259  6.0 6.4 -6.7 0.8 106.9 112.3 -21.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-328   LEU-329  8.9 8.7 -5.6 36.0 78.5 85.6 70.3
 LEU-329   ASP-330  6.1 6.4 16.6 -33.8 148.8 157.6 65.8
 ASP-330   ALA-331  4.3 4.9 16.1 -15.3 88.1 84.2 4.7
 ALA-331   THR-332  6.2 6.5 44.0 -28.3 22.4 18.4 74.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees