Glucosamine 6-Phosphate Deaminase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-4   PRO-5  8.4 8.6 -7.2 4.2 25.4 27.7 76.7
 PRO-5   LEU-6  8.1 8.2 7.8 -8.0 112.9 114.1 -25.3
 LEU-6   THR-7  5.6 5.8 -7.5 8.8 33.0 34.7 -12.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-137   VAL-138  8.5 8.6 6.3 -12.3 84.1 89.0 44.6
 VAL-138   GLY-139  11.4 11.7 0.6 5.3 53.8 45.7 114.0
 GLY-139   ASN-140  14.6 14.8 -0.1 -4.7 146.4 142.1 -43.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-143   ILE-144  16.7 17.2 15.4 -7.1 67.7 67.2 219.1
 ILE-144   ALA-145  14.0 14.7 1.1 0.3 52.3 66.0 90.0
 ALA-145   PHE-146  14.1 14.7 3.3 10.0 111.0 107.8 13.0
 PHE-146   ASN-147  17.9 18.5 -27.5 13.0 107.2 105.2 -55.9
 ASN-147   GLU-148  19.0 19.5 55.8 -26.7 149.7 146.8 -450.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-152   LEU-153  23.4 22.8 -4.9 8.4 88.6 91.1 -64.1
 LEU-153   ALA-154  20.9 19.9 5.3 -2.9 19.5 25.0 71.7
 ALA-154   SER-155  20.6 19.6 -7.1 6.5 107.4 97.8 56.6
 SER-155   ARG-156  20.3 19.9 8.2 -20.2 64.2 67.6 37.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-199   MET-200  6.8 7.0 -2.9 1.9 154.5 155.9 -14.5
 MET-200   ILE-201  4.9 5.1 -4.0 7.4 125.0 127.0 33.1
 ILE-201   LEU-202  6.1 6.3 -3.0 8.5 149.3 148.8 101.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-233   LYS-234  14.9 14.5 -12.8 -1.0 62.2 58.0 106.7
 LYS-234   ALA-235  11.7 11.5 3.0 2.2 124.8 130.8 -12.9
 ALA-235   ILE-236  10.3 10.4 0.0 -1.7 143.6 144.0 0.9
 ILE-236   MET-237  8.4 8.6 3.6 1.6 127.8 131.3 -116.2
 MET-237   VAL-238  7.6 7.9 -10.9 6.3 50.7 55.4 77.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-243   THR-244  8.2 8.1 -1.9 7.0 88.2 92.3 43.5
 THR-244   MET-245  10.0 10.0 3.3 4.8 38.8 41.8 74.0
 MET-245   GLU-246  11.4 11.7 -6.9 1.7 85.1 82.2 -9.9
 GLU-246   LEU-247  14.9 15.1 -1.3 -5.9 59.7 65.4 43.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-259   ALA-260  14.2 14.6 15.2 -10.9 124.1 122.3 23.5
 ALA-260   GLU-261  15.4 15.5 11.1 1.5 63.2 59.7 98.0
 GLU-261   ASN-262  16.7 16.8 3.7 -3.2 59.7 63.1 -45.7
 ASN-262   ILE-263  13.6 13.5 2.3 -3.3 121.7 123.6 -54.6
 ILE-263   LYS-264  11.3 11.4 7.8 13.6 124.2 121.7 -220.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees