Glycosyltransferase Gtf1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-301   THR-302  12.0 12.1 34.6 -25.6 81.1 71.3 51.6
 THR-302   ILE-303  8.3 8.4 -0.7 -12.8 36.4 40.1 54.1
 ILE-303   PRO-304  6.4 6.3 -2.0 3.3 114.9 111.2 6.3
 PRO-304   VAL-305  3.1 3.2 -6.1 -22.9 85.2 80.9 27.4
 VAL-305   GLY-306  5.5 6.0 37.7 -46.7 140.3 118.1 80.3
 GLY-306   SER-307  5.2 6.0 -45.0 49.4 43.8 57.6 -136.9
 SER-307   LEU-308  3.7 4.5 13.6 1.3 117.3 114.4 -5.2
 LEU-308   ASP-309  5.6 6.0 -4.5 2.0 11.5 16.9 44.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-484   LEU-485  3.5 2.8 80.1 -63.2 41.5 43.2 0.5
 LEU-485   THR-486  2.8 2.2 -0.9 7.8 99.3 112.4 32.1
 THR-486   SER-487  2.0 2.1 1.8 2.5 59.7 57.2 0.7
 SER-487   ARG-488  1.4 1.4 -5.9 0.6 57.3 53.7 46.7
 ARG-488   VAL-489  3.7 3.5 -14.4 12.4 48.1 57.8 12.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees