Adenylate Kinase Isoenzyme-2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-139   ILE-140  5.0 3.6 -18.4 7.4 32.0 40.5 15.9
 ILE-140   THR-141  2.7 1.4 7.2 1.4 85.0 78.3 5.1
 THR-141   GLY-142  3.4 3.7 10.9 13.2 72.8 79.0 4.9
 GLY-142   ARG-143  6.2 5.8 -23.6 -6.4 51.8 39.2 42.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-177   ASP-178  8.4 10.2 -88.6 30.0 122.0 77.5 -38.8
 ASP-178   ASP-179  8.1 7.0 -70.2 -39.9 69.3 35.2 204.2
 ASP-179   ASN-180  6.7 5.3 -89.0 36.6 108.2 30.5 63.3
 ASN-180   LYS-181  7.6 7.9 90.1 -5.8 117.9 115.7 -85.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees