Lysozyme

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ASN-2   ILE-3  10.1 10.3 1.0 -7.3 70.8 73.9 -3.3
 ILE-3   PHE-4  6.7 7.1 6.1 3.9 30.0 28.9 27.3
 PHE-4   GLU-5  5.5 5.8 -1.7 2.3 142.7 136.9 -8.0
 GLU-5   MET-6  8.4 8.6 1.1 1.5 83.8 93.3 5.1
 MET-6   LEU-7  8.8 9.0 5.6 -0.9 61.5 60.4 -1.3
 LEU-7   ARG-8  5.9 6.0 -3.1 2.8 162.0 169.9 7.2
 ARG-8   ILE-9  5.3 5.8 -5.6 0.0 125.2 114.8 -9.6
 ILE-9   ASP-10  8.8 9.3 -2.2 -1.2 96.5 86.0 0.0
 ASP-10   GLU-11  9.1 9.6 -14.3 5.3 120.8 115.2 -18.7
 GLU-11   GLY-12  6.3 7.1 -23.5 33.7 154.5 153.3 22.3
 GLY-12   LEU-13  5.0 5.0 -35.3 26.1 89.4 85.6 38.5
 LEU-13   ARG-14  1.5 1.5 10.2 18.3 25.3 34.6 50.2
 ARG-14   LEU-15  1.8 1.7 1.4 -10.5 96.6 93.4 -11.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ASN-68   GLN-69  4.8 5.0 9.5 -6.1 51.7 56.0 17.0
 GLN-69   ASP-70  6.5 6.3 5.8 0.3 77.4 80.8 5.4
 ASP-70   VAL-71  4.9 4.3 0.6 1.2 50.3 48.6 4.3
 VAL-71   ASP-72  1.5 1.2 -0.7 -3.3 157.0 156.1 -2.1
 ASP-72   ALA-73  3.8 3.6 8.0 -7.5 70.1 76.3 3.2
 ALA-73   ALA-74  6.2 5.7 -0.3 2.4 108.6 102.6 6.6
 ALA-74   VAL-75  5.1 4.6 4.3 -5.4 21.7 21.9 -5.8
 VAL-75   ARG-76  2.8 2.6 6.7 -1.2 49.0 48.2 10.4
 ARG-76   GLY-77  5.6 5.2 2.5 -8.8 77.5 80.6 0.0
 GLY-77   ILE-78  8.1 7.7 -3.6 8.5 129.1 118.8 5.5
 ILE-78   LEU-79  7.1 6.9 11.1 -2.1 19.5 7.4 15.3
 LEU-79   ARG-80  5.4 5.5 10.6 -8.7 62.9 62.7 4.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees