Homoserine Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-13   PRO-14  13.4 13.4 1.3 2.6 92.1 89.8 43.8
 PRO-14   GLU-15  12.6 12.5 -1.8 1.1 152.7 153.6 21.7
 GLU-15   ILE-16  12.7 12.5 5.0 -6.1 91.5 91.3 -46.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-57   GLY-58  4.5 4.5 2.1 -0.8 34.6 32.7 -3.9
 GLY-58   ASP-59  6.3 6.4 -2.1 -0.2 147.7 147.9 -22.8
 ASP-59   ILE-60  6.0 6.1 0.8 4.2 82.5 82.8 26.5
 ILE-60   GLN-61  2.9 3.0 -5.3 -1.3 109.5 110.9 -40.3
 GLN-61   GLU-62  2.2 2.3 5.9 -7.2 15.3 18.0 24.3
 GLU-62   VAL-63  3.6 3.8 -3.7 5.8 124.2 126.9 -1.8
 GLU-62   VAL-63  3.6 3.8 -3.7 5.8 124.2 126.9 -1.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-62   VAL-63  3.6 3.8 -3.7 5.8 124.2 126.9 -1.8
 GLU-62   VAL-63  3.6 3.8 -3.7 5.8 124.2 126.9 -1.8
 VAL-63   ILE-64  1.1 1.3 -4.4 6.4 85.8 86.5 15.7
 ILE-64   ALA-65  2.5 2.3 -3.9 -1.1 119.4 118.7 -45.9
 ALA-65   THR-66  4.2 4.4 3.3 2.2 15.2 14.7 62.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-113   LEU-114  5.1 5.2 -21.3 8.1 90.4 94.1 -57.6
 LEU-114   GLU-115  2.0 2.0 -0.7 4.2 132.0 129.0 54.6
 GLU-115   ILE-116  1.8 1.3 1.9 1.9 125.4 127.1 -11.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-124   TYR-125  5.8 5.4 2.9 -0.8 69.1 70.3 49.0
 TYR-125   GLN-126  5.1 4.9 -2.0 -4.6 31.9 36.5 42.7
 GLN-126   LEU-127  6.1 6.0 4.2 -9.0 69.0 69.5 -15.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees