Transcriptional Regulator Cuer

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-85   GLU-86  6.5 6.0 0.8 1.0 115.6 116.6 -0.2
 GLU-86   LYS-87  7.1 6.6 -4.0 -1.1 89.0 87.7 -4.9
 LYS-87   VAL-88  3.7 3.3 3.1 0.8 26.6 27.0 27.9

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees