Glutamine Abc Transporter Permease And Substrate Binding Protein Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-111   TYR-112  7.5 8.0 -9.2 4.0 115.4 113.4 -5.8
 TYR-112   THR-113  3.8 4.4 -22.0 -15.6 50.6 54.1 49.4
 THR-113   SER-114  0.5 1.6 -47.5 38.6 115.5 129.2 -13.0
 SER-114   ALA-115  3.4 1.7 -10.6 39.8 73.2 66.8 -3.5
 ALA-115   LEU-116  6.3 5.1 28.1 6.2 47.5 51.3 57.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-198   ALA-199  14.9 15.2 8.8 11.5 59.1 50.9 26.7
 ALA-199   MET-200  16.1 16.1 1.8 -3.6 24.4 34.0 -3.6
 PRO-203   SER-204  15.5 17.8 -176.1 -17.5 80.6 165.1 260.7
 SER-204   ILE-205  11.8 16.3 -7.3 58.4 149.9 108.5 -375.1
 ILE-205   SER-206  10.5 13.6 18.9 11.0 88.3 93.4 -26.5
 SER-206   LEU-207  6.9 10.3 27.1 6.6 67.0 29.2 32.2
 LEU-207   PRO-208  6.1 9.2 20.4 8.5 72.6 88.4 -34.9
 PRO-208   GLY-209  3.1 5.7 153.0 -76.6 101.1 95.8 7.1
 GLY-209   GLY-210  5.2 5.7 71.9 19.7 141.4 91.1 -23.6
 TYR-211   GLY-212  6.3 6.0 3.4 -1.0 74.8 73.1 -1.6
 GLY-212   PHE-213  9.8 9.5 -3.3 -7.2 47.1 48.4 14.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees