B-Raf Proto-Oncogene Serine/threonine-Protein Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-482   MET-483  8.5 8.8 -14.7 40.7 119.7 123.8 45.6
 MET-483   LEU-484  6.0 6.6 -28.0 -6.8 127.5 106.9 -52.8
 LEU-484   ASN-485  5.4 5.6 -164.6 -152.7 156.4 168.8 122.5
 ASN-485   VAL-486  5.6 7.0 105.8 -85.1 44.9 77.1 36.8
 VAL-486   THR-487  4.4 4.2 26.1 -39.4 89.0 58.9 -34.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-503   LEU-504  5.1 4.8 -0.5 4.2 108.7 97.0 5.7
 LEU-504   ARG-505  4.0 3.4 5.9 -22.5 55.4 49.4 -33.4
 ARG-505   LYS-506  1.0 0.9 29.7 -18.3 21.5 18.9 15.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees