Urokinase Plasminogen Activator Surface Receptor

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-102   MET-103  13.2 14.2 61.4 -161.9 101.4 103.8 80.8
 MET-103   SER-104  10.7 13.0 -75.1 -7.4 23.0 124.7 76.1
 SER-104   CYS-105  10.5 9.8 148.5 -1.6 95.2 121.9 -106.6
 CYS-105   GLU-106  7.6 7.7 -28.3 24.2 91.4 67.0 -3.4
 GLU-106   ARG-107  10.2 10.7 -150.2 166.9 163.2 129.1 74.1
 ARG-107   GLY-108  10.3 12.0 53.3 134.4 69.3 61.3 185.3
 GLY-108   ARG-109  7.0 9.3 44.3 -33.1 94.0 17.2 24.2
 ARG-109   HIS-110  5.1 8.5 -92.1 -166.4 146.4 89.9 -669.7
 HIS-110   GLN-111  4.9 4.8 178.2 -66.8 46.4 26.3 404.4
 GLN-111   SER-112  2.6 2.5 34.7 22.1 106.5 96.7 -84.1
 SER-112   LEU-113  1.3 1.2 -24.4 14.8 101.7 102.9 -25.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-126   THR-127  5.4 5.5 -18.3 2.3 36.5 48.1 65.8
 THR-127   HIS-128  8.3 8.9 -26.5 17.2 87.8 76.6 2.1
 HIS-128   TRP-129  9.7 10.1 -12.1 94.1 32.7 42.2 -257.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-140   ASP-141  15.9 15.2 -124.9 -25.1 89.5 68.0 -110.4
 ASP-141   ARG-142  12.5 12.5 9.2 53.3 144.2 49.0 114.1
 ARG-142   HIS-143  10.4 10.4 -175.2 6.1 82.4 71.1 121.3
 HIS-143   LEU-144  7.2 7.4 8.7 -7.2 146.4 145.0 -17.0
 LEU-144   ARG-145  6.1 6.7 -2.6 -10.3 80.4 77.4 -17.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-155   SER-156  10.0 11.3 43.3 -44.8 95.5 94.8 9.4
 SER-156   ASN-157  6.6 8.0 23.9 -14.6 142.9 163.9 -23.1
 ASN-157   GLY-158  5.9 6.7 8.5 29.3 97.6 97.8 -42.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-166   PHE-167  5.8 5.9 -2.6 0.6 81.0 78.2 16.9
 PHE-167   LEU-168  3.1 3.6 -5.2 9.5 34.0 31.2 -18.2
 LEU-168   LYS-169  4.6 5.5 13.0 -14.3 94.2 102.2 -15.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-180   ILE-181  8.5 7.5 -35.3 9.0 57.3 58.7 45.7
 ILE-181   LEU-182  6.9 5.5 8.3 -10.0 161.1 166.9 14.4
 LEU-182   GLU-183  5.6 4.7 11.8 -11.2 129.1 124.1 15.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees