Glucosamine 6-Phosphate Deaminase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-136   GLY-137  7.3 7.3 4.6 -2.6 4.3 11.4 64.4
 GLY-137   VAL-138  8.7 8.8 2.5 -9.3 84.7 88.8 45.3
 VAL-138   GLY-139  11.7 11.8 -3.3 3.8 125.3 133.3 64.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-142   HIS-143  16.9 16.7 -1.6 -5.5 160.9 156.1 -120.5
 HIS-143   ILE-144  16.9 17.3 15.8 -1.1 68.6 69.2 266.1
 ILE-144   ALA-145  14.1 14.7 4.3 -4.7 51.7 68.2 54.7
 ALA-145   PHE-146  14.2 14.8 8.3 4.5 110.0 107.1 38.6
 PHE-146   ASN-147  18.0 18.6 -27.7 11.2 107.7 107.1 -52.2
 ASN-147   GLU-148  19.1 19.6 50.0 -13.9 149.0 144.3 -516.0
 GLU-148   PRO-149  21.6 22.4 -0.3 -21.9 85.7 82.2 35.3
 PRO-149   ALA-150  23.6 22.8 20.5 -3.8 45.6 51.5 253.8
 ALA-150   SER-151  25.8 24.8 -15.1 14.6 152.7 158.5 -25.7
 SER-151   SER-152  23.3 23.1 13.2 -6.2 63.3 54.6 89.8
 SER-152   LEU-153  23.4 22.9 0.8 4.8 92.4 85.5 15.9
 LEU-153   ALA-154  20.9 20.0 -0.4 0.7 159.6 153.8 59.5
 ALA-154   SER-155  20.6 19.7 -12.9 12.2 107.8 95.3 68.4
 SER-155   ARG-156  20.3 20.1 -2.3 -13.9 115.1 110.2 -2.6
 ARG-156   THR-157  18.3 18.1 -10.9 14.6 67.0 68.7 25.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-201   LEU-202  6.2 6.4 -3.3 5.1 150.1 149.5 58.4
 LEU-202   VAL-203  4.5 4.6 -8.0 5.0 132.3 134.0 -80.0
 VAL-203   LEU-204  6.6 6.6 -4.4 1.2 148.2 148.6 3.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-233   LYS-234  14.8 14.7 -16.0 -1.0 61.4 56.7 110.6
 LYS-234   ALA-235  11.6 11.7 7.6 -3.5 124.2 127.6 16.1
 ALA-235   ILE-236  10.3 10.5 3.4 -5.2 144.6 144.7 -28.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-243   THR-244  8.5 8.4 3.5 2.3 91.6 88.2 40.0
 THR-244   MET-245  10.1 10.2 0.3 10.5 39.4 41.2 92.2
 MET-245   GLU-246  11.6 11.9 -9.3 1.1 84.6 83.7 -5.3
 GLU-246   LEU-247  15.1 15.3 -0.8 -4.0 60.2 64.8 3.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-256   GLU-257  14.2 14.3 2.2 -2.0 75.3 74.9 -0.2
 GLU-257   LEU-258  17.7 17.8 0.4 -9.5 17.5 9.8 -119.7
 LEU-258   GLU-259  17.0 17.7 13.3 -10.3 77.5 66.8 134.0
 GLU-259   ALA-260  14.0 14.5 6.8 -6.4 124.9 124.4 56.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees