Amylomaltase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-215   ILE-216  6.9 6.7 4.4 -9.3 102.8 100.9 37.3
 ILE-216   PHE-217  3.6 3.5 -11.6 13.1 131.4 134.2 -37.4
 PHE-217   VAL-218  4.1 4.4 1.9 -12.0 24.7 26.8 -159.6
 VAL-218   ALA-219  4.0 4.1 -4.4 9.3 111.6 116.9 80.1
 ALA-219   GLU-220  6.9 6.8 -5.0 4.4 120.2 119.0 30.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-224   VAL-225  2.3 2.1 -8.2 7.6 71.5 71.4 62.7
 VAL-225   TRP-226  5.1 4.9 -2.0 2.9 140.4 140.2 10.3
 TRP-226   ALA-227  6.3 6.1 3.8 -2.7 80.9 84.0 20.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-275   TRP-276  7.3 6.9 1.4 1.0 59.0 54.5 6.4
 TRP-276   ILE-277  6.6 6.7 0.2 -0.3 91.4 94.2 -32.3
 ILE-277   ARG-278  10.3 10.5 -4.0 8.1 33.0 38.2 -27.4
 ARG-278   ARG-279  10.0 9.9 -6.3 -0.5 90.1 96.2 12.5
 ARG-279   LEU-280  7.5 7.7 0.3 3.1 60.4 57.1 39.0
 LEU-280   GLU-281  10.0 10.3 -10.2 5.2 64.4 61.1 77.4
 GLU-281   LYS-282  13.0 13.3 -1.5 1.8 47.5 52.1 -18.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-293   HIS-294  8.5 8.6 10.1 -3.2 115.5 113.2 -10.2
 HIS-294   PHE-295  7.2 7.2 -7.3 5.0 71.4 68.5 36.5
 PHE-295   ARG-296  4.8 4.8 -6.7 5.6 53.5 57.0 56.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-315   TRP-316  15.5 15.9 0.0 -3.0 90.3 89.1 -88.9
 TRP-316   VAL-317  11.9 12.4 7.9 -8.1 98.5 99.8 19.9
 VAL-317   LYS-318  10.8 11.1 -0.5 4.6 99.8 100.6 0.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-346   PRO-347  5.7 6.2 0.8 -6.6 113.0 109.3 36.9
 PRO-347   GLU-348  3.1 3.2 6.4 1.8 58.2 57.0 41.9
 GLU-348   VAL-349  1.0 1.7 -2.1 -2.0 141.8 138.3 -74.1
 VAL-349   GLU-350  2.1 2.2 0.1 1.5 108.0 109.5 -7.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees