Programmed Cell Death 6-Interacting Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-406   ASP-407  9.7 8.5 -66.5 25.9 125.1 124.0 -32.0
 ASP-407   VAL-408  6.9 6.6 49.8 -92.8 59.5 90.0 -30.5
 VAL-408   SER-409  5.1 3.0 179.8 -44.1 69.8 29.0 144.7
 SER-409   GLY-410  4.6 3.2 141.1 161.2 113.5 101.1 20.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-537   ASN-538  9.1 8.9 11.2 14.2 110.5 67.7 -6.1
 ASN-538   PRO-539  6.7 6.0 15.7 25.3 48.1 15.7 56.3
 PRO-539   ALA-540  3.2 4.8 171.8 -81.3 69.6 45.6 79.7
 ALA-540   LYS-541  2.6 5.1 -17.4 37.7 72.8 62.8 -16.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-636   SER-637  2.4 3.8 -20.4 -46.2 96.6 99.5 -7.6
 SER-637   LYS-638  1.3 0.4 58.1 8.2 69.6 117.8 -6.3
 LYS-640   GLN-641  2.1 6.4 -169.4 88.0 72.0 121.1 0.9
 GLN-641   SER-642  5.6 9.8 145.5 -124.1 41.2 42.2 48.4
 SER-642   ASN-643  8.8 9.0 71.0 2.6 125.0 73.2 -18.7
 ASN-643   ASN-644  12.3 12.1 -18.8 2.4 94.3 89.5 -6.0
 ASN-644   GLU-645  14.2 14.0 -21.1 -61.5 139.6 99.5 -73.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees