Aspartyl Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-285   LEU-286  2.3 2.2 -1.2 0.0 116.4 117.9 4.6
 LEU-286   ARG-287  4.1 4.1 10.7 -8.3 30.7 27.1 45.1
 ARG-287   ASN-288  2.0 2.0 -17.3 17.1 76.9 76.7 66.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-307   ALA-308  16.6 16.6 -1.3 15.5 132.6 136.4 273.2
 ALA-308   GLY-309  17.5 17.4 -26.3 10.3 124.0 113.8 -207.2
 GLY-309   PRO-310  14.3 14.0 -12.0 16.8 62.9 53.9 -89.5
 PRO-310   ALA-311  11.9 11.7 1.7 2.2 73.8 73.9 -14.5
 PRO-310   ALA-311  11.9 11.7 1.7 2.2 73.8 73.9 -14.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-310   ALA-311  11.9 11.7 1.7 2.2 73.8 73.9 -14.5
 PRO-310   ALA-311  11.9 11.7 1.7 2.2 73.8 73.9 -14.5
 ALA-311   ASN-312  14.6 14.6 -30.1 30.3 42.8 51.3 -77.2
 ASN-312   ASP-313  15.1 15.3 -37.8 34.1 61.2 70.5 88.4
 ASP-313   PRO-314  11.5 11.7 -9.9 -3.3 120.2 129.8 -171.9
 PRO-314   LYS-315  10.8 11.3 21.0 -4.7 59.7 72.5 139.0
 LYS-315   GLY-316  7.1 7.5 -0.7 -30.9 134.7 138.2 -456.8
 GLY-316   ARG-317  8.4 8.0 14.4 -6.4 28.3 40.5 148.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-319   ALA-320  11.1 11.1 7.2 -12.0 51.3 51.2 -33.4
 ALA-320   LEU-321  13.2 13.1 -11.2 18.3 148.2 152.6 196.8
 LEU-321   ARG-322  11.8 11.6 12.9 -19.2 44.7 48.6 -93.3
 ARG-322   VAL-323  13.9 13.7 -7.6 1.0 139.7 147.1 -91.9
 VAL-323   PRO-324  13.3 13.3 -6.8 5.2 137.7 137.6 -77.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-403   ASP-404  2.8 2.8 12.6 -9.1 114.6 111.7 -70.3
 ASP-404   ALA-405  3.4 3.4 -14.9 6.7 62.9 62.5 85.4
 ALA-405   MET-406  6.8 6.9 18.0 -9.0 146.9 140.0 -163.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-410   LEU-411  6.5 6.5 -19.1 17.1 140.5 141.3 -59.3
 LEU-411   LYS-412  5.5 5.1 -1.2 3.8 111.3 111.8 -5.1
 LYS-412   VAL-413  9.3 8.9 -8.0 13.1 124.1 126.3 45.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-421   GLU-422  3.0 2.7 -17.1 25.6 86.3 88.2 -126.3
 GLU-422   SER-423  2.9 3.3 -17.5 -0.6 28.8 39.8 241.3
 SER-423   LYS-424  1.3 2.2 -29.4 51.2 97.9 101.5 100.7
 LYS-424   TRP-425  3.1 3.2 -1.7 -10.0 141.2 138.4 -179.8
 TRP-425   ALA-426  6.0 6.2 -11.0 12.2 132.3 128.3 84.2
 ALA-426   PRO-427  6.6 6.5 -1.1 0.2 130.0 130.9 -42.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees