Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-106
THR-107
7.2
7.2
-16.6
-0.5
25.4
31.8
29.0
THR-107
LEU-108
5.0
5.1
-27.1
18.7
101.3
107.4
0.9
LEU-108
GLY-109
1.4
1.3
6.6
-43.6
155.8
145.0
57.3
GLY-109
ILE-110
1.7
1.9
48.0
-25.3
79.7
72.5
7.6
ILE-110
SER-111
5.4
5.7
-3.9
5.1
94.5
96.5
1.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-209
LEU-210
9.2
9.4
3.6
-5.7
80.9
81.9
3.3
LEU-210
ILE-211
5.7
5.8
4.9
-34.9
13.3
22.6
-55.1
ILE-211
ASP-212
5.4
5.4
166.7
-148.3
65.0
89.9
26.8
ASP-212
SER-213
1.7
2.7
-133.9
74.8
44.9
50.1
93.1
SER-213
LYS-214
1.7
1.1
17.6
11.7
88.3
80.5
10.3
LYS-214
GLY-215
4.6
3.5
-22.5
19.0
21.9
41.3
4.6
GLY-215
TYR-216
6.8
6.6
-22.7
-1.2
72.1
68.3
20.4
TYR-216
GLY-217
9.0
8.9
-14.1
8.3
88.4
86.6
2.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees