Glutamate Receptor, Ionotropic Kainate 2
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-107
THR-108
6.4
6.4
3.0
5.7
32.7
37.0
47.4
THR-108
LEU-109
4.3
4.0
6.9
-2.0
106.6
110.1
-27.5
LEU-109
GLY-110
1.3
0.5
-5.6
13.2
139.1
139.7
34.6
GLY-110
ILE-111
3.0
3.2
-7.7
3.9
65.7
66.8
8.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-213
SER-214
4.6
4.8
-2.1
6.3
117.6
119.6
26.9
SER-214
LYS-215
1.6
1.4
3.0
-3.1
94.1
95.5
1.3
LYS-215
GLY-216
2.2
2.2
3.5
2.2
36.0
39.0
20.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TRP-252
ARG-253
1.0
1.5
9.5
30.6
133.4
134.2
-112.8
ARG-253
GLY-254
3.1
3.2
-54.3
46.8
46.8
66.3
29.4
GLY-254
ASN-255
3.5
3.2
-46.3
9.3
35.9
11.2
177.5
ASN-255
GLY-256
5.2
3.6
18.1
-13.1
84.6
107.9
9.5
GLY-256
CYS-257
8.4
6.9
-56.6
28.5
96.7
105.2
17.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees