Initiation Factor 5A

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-69   ILE-70  3.6 2.9 -12.2 10.9 113.7 110.1 -8.9
 ILE-70   ILE-71  2.1 1.3 6.1 -12.1 139.3 144.9 31.2
 ILE-71   ASP-72  3.0 3.1 -8.3 11.2 108.2 102.4 -6.6

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees