Regulator Of Nonsense Transcripts 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-320   LYS-321  4.7 1.0 -18.8 42.7 107.2 123.1 16.2
 LYS-321   GLU-322  1.8 1.5 -33.4 14.8 91.8 75.9 -4.9
 GLU-322   SER-323  3.0 4.0 -142.8 40.7 30.1 24.3 197.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-415   LYS-416  2.7 2.4 -6.1 -27.4 21.2 36.7 72.9
 LYS-416   SER-417  2.5 2.5 9.6 16.5 94.7 83.7 9.7
 SER-417   THR-418  5.9 5.4 -4.1 5.5 31.4 39.0 -0.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees