Complement Decay-Accelerating Factor

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-37   VAL-38  4.8 5.0 -19.0 2.5 39.3 34.3 48.3
 VAL-38   LYS-39  2.9 3.4 -1.0 -7.8 42.2 42.2 22.3
 LYS-39   ILE-40  3.4 3.5 -10.2 19.7 76.6 70.5 -26.4
 ILE-40   PRO-41  3.4 2.6 21.2 -20.8 161.1 157.8 0.2
 PRO-41   GLY-42  2.3 1.3 2.4 1.9 130.4 136.0 -9.2
 GLY-42   GLU-43  3.9 2.5 -23.9 27.8 95.7 91.5 16.5
 GLU-43   LYS-44  5.8 5.3 3.4 -0.8 107.4 104.5 -27.4
 LYS-44   ASP-45  7.8 7.6 2.6 -6.5 41.3 34.4 -18.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-61   CYS-62  7.9 7.9 -10.8 14.3 133.8 131.9 -26.3
 CYS-62   ASN-63  6.5 6.3 18.0 -14.0 43.3 50.5 4.8
 ASN-63   ARG-64  5.2 5.0 20.6 -11.2 44.8 41.8 77.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees