Camp-Dependent Protein Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-32   PRO-33  11.5 13.1 2.0 47.0 44.0 45.4 86.2
 PRO-33   SER-34  8.1 9.7 96.5 -99.4 94.8 57.3 -3.3
 SER-34   GLN-35  7.4 7.6 -23.1 9.6 80.1 70.2 -46.3
 GLN-35   ASN-36  4.5 5.6 36.3 -83.6 65.3 62.0 -289.4
 ASN-36   THR-37  5.8 6.5 -36.4 80.5 140.3 145.4 435.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-51   GLY-52  16.7 16.8 19.1 -41.4 46.3 56.1 -194.3
 GLY-52   SER-53  16.8 18.1 28.6 16.2 39.9 9.6 331.2
 SER-53   PHE-54  18.8 18.1 -176.2 -155.3 133.9 94.7 83.7
 PHE-54   GLY-55  15.5 14.6 -90.5 8.2 62.9 68.7 240.7
 GLY-55   ARG-56  14.0 14.6 -7.6 48.6 27.3 10.5 -245.0
 ARG-56   VAL-57  14.1 14.7 13.0 3.2 123.4 115.4 -134.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-69   ALA-70  4.9 4.7 -27.0 36.7 102.1 103.6 92.2
 ALA-70   MET-71  6.3 6.2 -1.5 3.9 170.4 173.5 -10.3
 MET-71   LYS-72  7.2 7.1 8.3 -12.1 65.0 59.3 4.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-74   ASP-75  11.0 10.4 -7.5 -5.0 38.3 42.2 20.5
 ASP-75   LYS-76  12.8 12.7 -16.6 7.6 32.3 31.1 132.8
 LYS-76   GLN-77  11.3 10.9 -19.1 30.6 57.6 57.4 -71.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-83   GLN-84  15.3 15.6 62.8 -90.6 138.3 140.4 212.1
 GLN-84   ILE-85  14.2 13.5 20.4 -1.9 86.7 82.2 21.7
 ILE-85   GLU-86  10.8 10.2 1.5 -16.4 100.2 105.3 53.0
 GLU-86   HIS-87  12.0 11.0 -1.3 9.3 15.1 14.5 -115.0
 HIS-87   THR-88  12.4 12.1 34.3 -38.7 113.9 119.0 -11.6
 THR-88   LEU-89  9.4 8.8 -21.8 18.7 96.0 99.5 -3.6
 LEU-89   ASN-90  7.5 6.8 7.3 4.5 122.5 112.6 -12.9
 ASN-90   GLU-91  9.9 9.7 0.0 -13.9 167.8 172.9 58.4
 GLU-91   LYS-92  9.2 9.1 -2.8 8.5 77.0 76.7 54.2
 LYS-92   ARG-93  5.8 5.5 17.9 -14.2 88.7 83.3 -13.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-104   LYS-105  7.3 7.2 19.8 -19.0 126.2 134.3 33.6
 LYS-105   LEU-106  4.9 5.1 5.6 -1.1 131.7 127.8 -70.3
 LEU-106   GLU-107  3.0 3.1 -33.1 27.5 90.2 94.9 -36.7
 GLU-107   PHE-108  2.7 3.2 -4.5 -1.4 32.9 37.6 65.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-110   LYS-111  4.8 5.0 9.2 -12.6 116.9 123.3 -46.7
 LYS-111   ASP-112  6.3 6.6 18.8 -15.8 109.5 109.7 -32.0
 ASP-112   ASN-113  9.7 10.0 58.2 -64.7 128.9 136.7 70.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-120   GLU-121  2.3 2.0 -3.7 7.0 28.2 21.7 -47.1
 GLU-121   TYR-122  1.4 1.2 -20.8 17.5 65.0 63.6 -4.0
 TYR-122   VAL-123  4.2 3.9 24.6 -36.9 144.7 141.8 72.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-315   PRO-316  11.1 10.8 -61.6 76.4 78.8 84.9 -84.7
 PRO-316   LYS-317  10.7 11.4 -10.5 -56.3 111.8 107.3 -232.4
 ASP-328   ASP-329  18.9 24.9 -31.6 37.0 70.4 52.8 -14.9
 ASP-329   TYR-330  20.9 21.9 91.5 22.1 155.8 172.5 -905.5
 TYR-330   GLU-331  21.4 21.6 2.9 -29.0 109.2 116.0 116.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees