DNA Polymerase IV (Family Y)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-235
PRO-236
15.4
16.2
-6.3
-15.3
47.6
44.5
10.2
GLU-235
PRO-236
15.4
16.2
-6.3
-15.3
47.6
44.5
10.2
PRO-236
ILE-237
12.6
13.6
3.4
21.6
84.0
80.9
1.3
ILE-237
ARG-238
9.7
10.4
29.5
11.5
87.0
73.8
19.3
ARG-238
THR-239
6.4
7.7
-6.6
18.6
143.3
103.7
6.3
THR-239
ARG-240
3.7
4.1
7.8
28.1
41.8
8.0
27.8
ARG-240
VAL-241
3.9
3.4
34.8
-173.3
40.8
64.3
-78.3
VAL-241
ARG-242
1.9
1.4
70.3
70.3
22.0
28.9
102.6
ARG-242
LYS-243
2.2
1.3
19.4
-20.8
50.0
35.1
-0.3
LYS-243
SER-244
1.6
1.1
8.1
-3.9
32.5
33.8
4.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees