Gna33

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-141   GLU-142  7.1 7.2 -6.1 9.6 144.1 139.9 -6.1
 GLU-142   PRO-143  4.4 4.4 -3.7 -2.2 77.0 82.0 26.5
 PRO-143   VAL-144  1.9 2.1 -1.2 4.0 97.3 94.2 51.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-335   GLU-336  8.3 8.2 -8.5 -4.2 147.5 144.5 -121.5
 GLU-336   LEU-337  10.0 9.9 -11.7 11.0 122.8 123.3 165.1
 ASP-343   GLY-344  12.0 11.0 35.0 -36.2 83.6 112.3 51.2
 GLY-344   PRO-345  10.1 9.7 -8.7 4.4 17.3 14.4 42.7
 PRO-345   VAL-346  9.8 9.6 1.2 2.8 98.9 99.6 44.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees