Dihydrodipicolinate Synthase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-50   SER-51  6.9 7.0 2.5 -3.7 56.2 57.5 -45.3
 SER-51   ALA-52  10.4 10.5 4.9 -3.9 7.1 8.9 46.6
 ALA-52   THR-53  9.1 9.1 -4.2 3.1 117.1 116.1 -68.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-54   THR-55  11.5 11.4 -2.6 1.7 46.3 46.9 -41.9
 THR-55   HIS-56  14.6 14.5 -2.9 8.5 117.9 120.5 144.8
 HIS-56   GLU-57  17.8 17.6 -3.6 0.7 130.0 130.4 -78.7
 GLU-57   GLU-58  19.4 19.3 3.8 -3.9 33.1 32.8 -27.2
 GLU-58   HIS-59  16.6 16.4 1.1 -3.2 54.8 51.8 61.5
 GLU-58   HIS-59  16.6 16.4 1.1 -3.2 54.8 51.8 61.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-58   HIS-59  16.6 16.4 1.1 -3.2 54.8 51.8 61.5
 GLU-58   HIS-59  16.6 16.4 1.1 -3.2 54.8 51.8 61.5
 HIS-59   ARG-60  16.6 16.6 0.8 1.7 56.5 56.6 -12.6
 ARG-60   THR-61  20.2 20.2 -2.2 1.0 139.7 136.6 -23.4
 THR-61   CYS-62  19.6 19.5 -0.2 0.0 142.1 142.4 52.9
 CYS-62   ILE-63  16.7 16.6 3.8 -4.6 57.1 55.3 -48.5
 ILE-63   GLU-64  19.0 18.9 1.5 -1.6 57.6 58.2 15.6
 GLU-64   ILE-65  21.7 21.7 2.8 -2.4 35.8 37.0 18.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-245   ILE-246  11.8 11.6 5.6 0.0 53.3 56.2 155.8
 ILE-246   LEU-247  10.1 10.0 -0.9 1.4 119.2 121.0 90.7
 LEU-247   PHE-248  6.8 6.8 1.5 -2.3 30.3 29.5 -13.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-254   PRO-255  2.7 2.6 0.2 1.5 26.2 27.9 67.6
 PRO-255   ILE-256  4.4 4.4 0.8 1.6 46.8 46.6 40.2
 ILE-256   LYS-257  1.3 1.3 -3.2 0.7 81.5 82.8 -29.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-264   LEU-265  10.7 10.6 0.0 -3.3 91.9 92.4 87.7
 LEU-265   ILE-266  8.9 8.9 -2.5 7.4 150.1 149.9 136.2
 ILE-266   GLU-267  10.1 10.0 -1.0 2.0 106.2 107.2 99.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-280   GLU-281  14.8 14.6 10.1 -2.3 43.7 45.9 348.6
 GLU-281   ASN-282  15.8 15.7 -3.0 1.3 125.3 125.2 29.2
 ASN-282   PHE-283  12.4 12.4 1.4 0.1 57.1 55.7 -48.5
 PHE-283   ALA-284  11.3 11.3 1.3 -3.3 29.3 29.8 -22.1
 ALA-284   LYS-285  14.2 14.2 2.1 -0.5 50.3 54.5 87.3
 LYS-285   ILE-286  13.4 13.5 -2.0 2.9 119.1 121.3 27.4
 ILE-286   GLU-287  9.7 9.8 -1.1 -1.6 136.3 139.6 -212.1
 GLU-287   GLU-288  11.2 11.1 3.1 6.7 31.4 37.4 524.9
 GLU-288   VAL-289  13.2 13.3 -0.1 -3.9 121.4 122.1 -123.8
 LYS-291   LYS-292  10.3 10.7 -15.5 11.2 143.3 144.9 -183.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees