Glycogen [Starch] Synthase Isoform 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-380   THR-381  6.8 6.2 14.3 -11.8 69.5 67.8 27.4
 THR-381   VAL-382  4.3 3.9 10.9 -9.4 40.9 37.0 7.8
 VAL-382   HIS-383  1.9 1.5 11.0 -4.1 31.4 34.3 28.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-399   TYR-400  9.4 9.3 4.9 -3.9 125.6 113.2 -3.4
 TYR-400   PRO-401  8.7 9.1 16.8 -29.7 170.9 173.2 -145.6
 GLU-415   LEU-416  11.8 11.8 -126.3 -10.6 66.8 103.4 139.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees