Bovine Mitochondrial F1-Atpase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-129   GLN-130  5.6 5.8 40.7 -6.7 58.0 43.5 116.5
 GLN-130   GLU-131  3.1 3.7 49.6 -29.0 89.2 83.1 -29.4
 GLU-131   ILE-132  6.1 6.1 66.0 -83.8 43.8 49.4 -30.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-149   GLY-150  5.6 5.4 -8.1 -10.2 89.0 80.4 6.2
 GLY-150   LYS-151  2.1 2.5 -0.3 -9.4 22.9 14.2 40.5
 LYS-151   ILE-152  2.7 2.8 6.2 -4.3 102.9 91.6 -0.2
 ILE-152   GLY-153  2.4 3.1 -22.6 47.5 35.5 31.6 -112.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-170   ASN-171  9.7 10.2 2.3 0.9 84.8 89.9 -14.6
 ASN-171   ASN-172  13.4 13.7 9.3 7.7 17.9 24.6 71.2
 ASN-172   VAL-173  13.9 14.5 -38.8 75.0 129.0 120.6 96.5
 VAL-173   ALA-174  11.9 13.0 158.3 -125.1 114.0 114.6 12.1
 ALA-174   LYS-175  11.5 16.4 115.6 -107.4 99.8 40.4 92.0
 LYS-175   ALA-176  15.0 17.7 -98.4 62.0 138.4 135.9 -198.3
 ALA-176   HIS-177  16.6 16.9 -69.5 -22.9 113.7 86.9 -75.8
 HIS-177   GLY-178  14.5 14.9 -109.8 -144.1 82.3 32.1 -225.4
 GLY-178   GLY-179  17.0 16.7 -159.4 -57.2 93.8 32.6 -364.1
 GLY-179   TYR-180  15.7 14.6 -161.0 2.8 21.6 40.4 718.7
 TYR-180   SER-181  14.3 13.6 -32.4 5.9 85.4 80.7 -2.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-184   GLY-185  6.0 5.6 -3.0 -1.5 117.9 118.6 7.5
 GLY-185   VAL-186  3.5 3.3 -14.0 20.8 104.7 109.2 25.3
 VAL-186   GLY-187  5.6 5.7 0.4 17.9 59.7 48.5 114.9
 GLY-187   GLU-188  6.3 5.7 7.9 38.4 83.4 77.9 93.7
 GLU-188   ARG-189  3.4 2.1 -68.0 3.1 154.9 158.4 -346.3
 ARG-189   THR-190  2.4 1.8 -1.8 5.5 105.3 113.0 66.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-218   TYR-219  9.5 9.1 -17.8 24.4 115.1 116.5 2.3
 TYR-219   GLY-220  7.2 6.9 -10.0 33.3 118.9 108.2 50.8
 GLY-220   GLN-221  7.7 7.6 21.5 -4.8 79.3 57.0 62.5
 GLN-221   MET-222  4.9 5.5 -21.7 1.7 116.4 104.4 -116.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-254   ILE-255  3.5 3.1 -6.6 8.6 131.2 125.5 -7.6
 ILE-255   ASP-256  2.6 2.8 -21.1 18.3 111.5 113.3 25.2
 ASP-256   ASN-257  1.8 2.1 -2.1 2.5 144.0 143.1 -13.0
 ASN-257   ILE-258  4.7 5.0 19.5 -13.8 105.6 111.1 -24.5
 ILE-258   PHE-259  7.2 7.5 0.0 -5.2 75.0 70.4 12.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-329   ASP-330  6.6 6.8 -6.7 -10.9 22.6 22.4 58.3
 ASP-330   ALA-331  4.6 4.9 6.0 -16.0 84.5 85.2 13.0
 ALA-331   THR-332  5.5 5.9 26.7 -4.7 27.2 21.4 106.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees