Vitamin D Hydroxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-96   ARG-97  11.6 12.1 6.8 -5.5 97.2 94.6 10.1
 ARG-97   LEU-98  10.7 11.3 5.6 -1.6 120.7 122.9 -22.8
 LEU-98   ARG-99  7.1 7.9 -6.9 10.5 14.2 13.6 -39.7
 ARG-99   LYS-100  7.7 8.6 -1.5 -6.2 58.8 61.9 53.0
 LYS-100   LEU-101  10.7 11.7 -5.8 -4.4 77.7 73.9 8.2
 LEU-101   VAL-102  9.3 10.6 -6.8 36.6 37.4 43.3 -150.0
 VAL-102   GLY-103  6.4 7.4 -29.5 -5.0 32.5 26.6 211.8
 GLY-103   ARG-104  8.1 9.2 17.5 -1.1 145.6 116.1 -106.9
 ARG-104   SER-105  9.9 11.9 -8.1 -34.0 58.6 53.6 169.2
 SER-105   PHE-106  7.2 10.1 -30.1 43.4 55.1 57.2 -72.8
 PHE-106   THR-107  5.1 6.5 63.6 -37.0 126.9 124.7 -165.9
 THR-107   VAL-108  8.1 8.2 5.6 -7.9 153.1 137.0 36.3
 VAL-108   ARG-109  7.8 7.4 12.4 -5.8 122.3 138.5 -34.1
 ARG-109   ARG-110  8.8 8.4 9.9 -4.1 78.2 88.9 -30.0
 ARG-110   MET-111  7.2 6.7 2.6 9.7 108.3 105.4 -71.5
 MET-111   ASN-112  3.5 3.2 -0.7 -21.4 8.5 7.6 148.7
 ASN-112   GLU-113  4.4 4.1 8.0 -16.8 106.4 115.1 37.0
 GLU-113   LEU-114  6.4 6.0 13.9 2.7 86.2 87.0 -14.3
 LEU-114   GLU-115  4.6 4.6 -1.4 12.0 41.0 38.1 -69.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-145   PRO-146  11.2 11.4 8.7 -1.5 40.0 41.0 40.5
 PRO-146   VAL-147  9.2 9.5 7.9 -15.6 47.7 49.8 -17.5
 VAL-147   GLN-148  11.3 11.1 10.7 -5.5 105.5 112.3 -2.3
 GLN-148   VAL-149  11.6 11.4 3.8 -4.5 88.5 95.7 9.4
 VAL-149   ILE-150  7.9 7.6 7.9 3.0 20.9 31.0 64.7
 ILE-150   CYS-151  7.3 7.0 -3.4 3.9 114.2 103.0 -28.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-223   GLU-224  8.0 9.8 -14.6 14.8 96.6 88.7 -6.7
 GLU-224   GLU-225  4.9 6.5 -10.7 0.2 137.6 133.3 -32.2
 GLU-225   LEU-226  3.1 4.8 -3.0 0.1 150.5 159.9 -20.6
 LEU-226   VAL-227  5.7 6.7 -0.8 -9.1 103.7 105.4 -33.2
 VAL-227   ALA-228  6.3 6.8 15.9 -2.9 72.6 91.2 31.8
 ALA-228   MET-229  3.6 3.5 -6.9 5.0 158.5 153.0 -10.5
 MET-229   ALA-230  2.0 2.1 -1.0 1.9 132.1 137.8 0.4
 ALA-230   MET-231  5.5 5.0 -4.2 1.9 93.4 89.2 5.6
 MET-231   LEU-232  6.7 6.0 5.4 -4.4 56.2 70.6 -3.8
 LEU-232   LEU-233  4.8 4.0 0.4 11.2 8.4 5.3 92.6
 LEU-233   LEU-234  3.9 3.1 5.8 -11.7 67.6 66.2 -34.5
 LEU-234   ILE-235  7.6 6.8 0.4 -2.0 81.1 96.9 -10.2
 ILE-235   ALA-236  9.2 8.6 -1.8 -16.2 138.9 123.4 -74.4
 ALA-236   GLY-237  7.6 7.6 9.9 -32.4 29.7 8.1 -133.6
 GLY-237   HIS-238  7.7 6.7 9.9 14.1 75.3 62.4 71.5
 HIS-238   GLU-239  11.5 9.9 -57.8 83.2 97.3 100.5 27.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees