DNA Polymerase IV (Family Y)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-235
PRO-236
9.0
8.3
-18.5
-11.3
79.6
66.9
102.7
PRO-236
ILE-237
12.1
10.8
29.8
5.5
71.6
63.6
128.4
ILE-237
ARG-238
12.7
12.1
0.0
39.3
125.5
129.7
317.7
GLU-235
PRO-236
15.9
16.5
-18.5
-11.3
48.8
38.5
18.5
PRO-236
ILE-237
13.2
14.2
29.8
5.5
85.5
84.8
0.9
ILE-237
ARG-238
10.0
10.7
0.0
39.3
95.3
102.9
13.0
ARG-238
THR-239
7.1
8.6
17.9
16.4
38.3
81.1
11.6
GLU-235
PRO-236
9.0
8.3
-18.5
-11.3
79.6
66.9
102.7
PRO-236
ILE-237
12.1
10.8
29.8
5.5
71.6
63.6
128.4
ILE-237
ARG-238
12.7
12.1
0.0
39.3
125.5
129.7
317.7
GLU-235
PRO-236
15.9
16.5
-18.5
-11.3
48.8
38.5
18.5
PRO-236
ILE-237
13.2
14.2
29.8
5.5
85.5
84.8
0.9
ILE-237
ARG-238
10.0
10.7
0.0
39.3
95.3
102.9
13.0
ARG-238
THR-239
7.1
8.6
17.9
16.4
38.3
81.1
11.6
THR-239
ARG-240
4.2
4.9
65.9
-26.9
38.7
30.9
30.4
ARG-240
VAL-241
4.7
3.7
29.9
-174.6
42.7
66.2
-79.0
VAL-241
ARG-242
2.9
1.2
65.0
68.2
21.5
40.7
92.9
ARG-242
LYS-243
3.0
2.1
7.6
-13.0
49.9
36.0
-0.6
LYS-243
SER-244
1.9
0.8
15.1
-3.9
34.6
31.5
10.3
SER-244
ILE-245
3.4
2.9
-2.8
-2.5
71.4
77.0
5.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees