Nad-Dependent Deacetylase Sirtuin-3, Mitochondrial

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-151   SER-152  9.2 9.0 -42.7 20.3 73.0 70.9 129.1
 SER-152   GLY-153  5.9 5.8 4.2 -4.8 121.4 115.0 60.8
 GLY-153   ILE-154  5.1 4.7 -7.6 17.2 121.9 125.2 63.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-200   PRO-201  7.3 7.4 -6.1 -3.6 109.1 113.5 -17.0
 PRO-201   GLY-202  7.6 7.7 -5.1 17.3 162.0 154.2 143.3
 GLY-202   ASN-203  8.1 8.4 -30.9 30.1 135.8 128.8 43.7
 ASN-203   TYR-204  5.2 5.4 4.4 -9.9 80.2 80.8 -101.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-246   ALA-247  2.6 2.3 20.6 -10.9 56.6 58.4 34.3
 ALA-247   HIS-248  1.7 1.8 -1.3 7.5 73.6 75.4 -20.6
 HIS-248   GLY-249  3.0 3.2 -16.2 17.4 71.6 79.1 6.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-298   PRO-299  3.8 4.1 -0.5 6.5 72.3 79.3 -16.1
 PRO-299   GLN-300  3.1 3.1 -10.0 10.8 41.0 35.6 43.0
 GLN-300   ARG-301  3.5 3.7 -5.0 -2.2 98.5 97.9 40.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees