Camp-Dependent Protein Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-97   VAL-98  8.9 9.9 72.0 -68.1 158.7 166.0 36.1
 VAL-98   ASN-99  9.5 9.3 -45.8 26.6 60.8 56.2 -1.8
 ASN-99   PHE-100  9.5 9.1 -0.9 23.4 24.8 21.8 -92.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-101   PHE-102  7.2 7.3 -27.7 28.8 100.0 95.4 -91.5
 PHE-102   LEU-103  5.5 5.8 -7.9 0.0 33.0 38.5 85.7
 LEU-103   VAL-104  4.9 5.5 -4.2 -1.0 72.4 67.9 -31.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-121   TYR-122  5.3 4.4 0.1 -3.7 118.6 110.3 26.6
 TYR-122   VAL-123  7.3 7.0 -7.0 7.6 16.0 21.2 -1.6
 VAL-123   ALA-124  5.9 5.8 22.6 -16.3 121.3 121.7 -20.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees