Mrna Capping Enzyme

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-234   LEU-235  5.0 5.1 4.0 13.6 122.9 125.3 -15.9
 LEU-235   LYS-236  4.2 4.2 0.7 58.9 112.2 122.2 -30.6
 LYS-236   PRO-237  6.5 6.5 14.0 -9.8 138.0 98.9 10.1
 PRO-237   GLY-238  7.9 8.8 2.0 163.2 150.6 161.2 -606.0
 GLY-238   THR-239  5.6 8.1 146.1 15.5 161.2 115.9 800.5
 THR-239   HIS-240  7.6 5.8 16.8 39.7 86.5 115.2 -60.4
 HIS-240   HIS-241  8.5 7.8 10.4 36.0 82.9 81.3 97.9
 HIS-241   THR-242  6.1 6.3 30.4 7.2 152.7 153.9 -164.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-315   GLU-316  4.8 4.7 2.0 0.7 141.1 147.9 41.4
 GLU-316   ASN-317  5.8 5.6 -4.6 10.4 78.8 76.3 -32.7
 ASN-317   ILE-318  5.4 5.3 1.3 -10.6 156.5 154.0 71.5
 ILE-318   THR-319  5.6 5.3 2.1 -7.4 103.9 91.3 18.1
 THR-319   ILE-320  7.9 7.5 11.6 -17.7 167.8 164.2 23.8
 ILE-320   ASP-321  8.6 8.6 9.8 -9.2 123.3 117.4 31.8
 ASP-321   GLU-322  11.3 11.5 17.6 -12.1 94.3 96.6 -66.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees