Putative Outer Membrane Chaperone (Omph-Like)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-46   ILE-47  17.1 17.3 176.4 -42.9 124.2 142.1 -73.5
 ILE-47   GLN-48  15.4 16.4 -162.2 -97.2 119.1 82.6 13.9
 GLN-48   GLN-49  15.4 13.4 -151.4 -25.7 135.2 36.4 10.3
 GLN-49   VAL-50  13.5 12.8 149.7 -13.6 111.6 74.1 -3.3
 VAL-50   ASN-51  11.0 14.3 -176.0 -68.2 75.9 32.9 -46.4
 ASN-51   ALA-52  10.5 13.8 -142.5 -6.5 143.4 104.8 109.9
 ALA-52   GLU-53  10.5 16.0 -154.6 -9.2 107.2 124.1 -31.4
 GLU-53   LEU-54  7.4 15.5 28.0 -15.9 120.6 122.5 -1.1
 LEU-54   THR-55  5.4 15.1 25.8 4.4 87.3 118.1 -5.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-90   ALA-91  7.0 14.0 -157.6 -55.0 132.2 47.7 -32.9
 ALA-91   ASN-92  5.6 17.1 175.0 -51.9 48.1 66.0 41.5
 ASN-92   ALA-93  6.1 19.5 -179.8 -53.7 68.3 39.7 -47.5
 ALA-93   TRP-94  6.0 22.8 179.2 -64.0 95.7 87.9 21.4
 TRP-94   GLN-95  2.2 25.3 -166.9 -4.7 150.9 59.7 31.6
 GLN-95   ARG-96  2.1 28.9 7.4 -94.2 82.9 166.9 36.0
 ARG-96   LYS-97  5.8 28.2 -147.8 -0.1 59.5 78.9 -140.5
 LYS-97   GLY-98  5.9 25.9 15.4 -12.2 61.9 65.7 -3.7
 GLY-98   GLN-99  5.2 27.6 5.0 -3.6 46.7 25.2 2.1
 GLN-99   LEU-100  7.1 26.4 -7.5 2.0 67.6 87.4 0.5
 LEU-100   ARG-101  9.9 22.9 4.0 -16.7 104.9 106.2 2.3
 ARG-101   GLN-102  10.4 22.3 20.8 -14.0 40.7 52.1 -3.7
 GLN-102   LYS-103  11.0 24.1 14.9 -2.7 73.7 44.2 4.5
 LYS-103   GLU-104  13.5 21.4 -1.6 -2.8 43.1 69.1 1.3
 GLU-104   VAL-105  15.0 18.8 -10.6 4.5 90.2 89.8 -0.1
 VAL-105   GLU-106  15.8 20.8 14.0 -18.0 41.6 24.8 -1.1
 GLU-106   ALA-107  17.2 21.4 21.8 161.7 100.6 64.0 98.7
 ALA-107   THR-108  19.4 17.6 48.1 -24.2 132.1 48.2 -1.0
 THR-108   GLU-109  20.4 17.8 31.1 -70.8 62.6 110.4 9.9
 GLU-109   GLN-110  21.6 15.8 -157.7 -23.1 118.0 54.5 -83.5
 GLN-110   LYS-111  23.5 12.6 31.3 -108.9 127.4 164.7 46.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees