Protein (Surface Antigen Psaa)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-188   ASP-189  11.9 12.0 5.5 -6.2 110.2 115.3 -68.8
 ASP-189   LYS-190  14.7 14.8 1.4 5.0 75.9 77.7 -30.6
 LYS-190   PHE-191  13.4 13.5 -3.8 -3.7 59.6 56.6 212.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-202   THR-203  6.9 6.9 0.7 -3.8 161.9 161.7 20.0
 THR-203   SER-204  6.9 7.0 -0.6 5.2 87.5 88.6 156.3
 SER-204   GLU-205  10.0 10.0 0.7 -8.4 61.3 61.7 -75.9
 GLU-205   GLY-206  10.0 9.9 0.5 -5.4 44.6 45.8 -127.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-207   PHE-208  7.6 7.7 -0.4 1.4 107.7 104.3 57.4
 PHE-208   LYS-209  4.6 4.6 -3.5 1.9 160.6 159.3 -68.3
 LYS-209   TYR-210  6.3 6.1 2.3 -2.6 81.4 83.4 30.2
 TYR-210   PHE-211  7.7 7.6 2.4 -1.2 93.6 93.9 26.9
 PHE-211   SER-212  5.0 5.0 -1.1 2.9 151.4 152.3 30.3
 SER-212   LYS-213  3.0 3.0 0.3 1.6 43.1 44.6 -2.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-217   PRO-218  2.8 2.9 -2.9 0.9 86.0 87.1 -37.2
 PRO-218   SER-219  1.7 1.5 2.3 -0.4 34.1 36.9 75.7
 SER-219   ALA-220  4.1 4.0 -2.1 5.5 78.2 76.0 94.1
 ALA-220   TYR-221  7.7 7.6 -0.1 -1.0 20.8 20.7 49.5
 ALA-220   TYR-221  7.7 7.6 -0.1 -1.0 20.8 20.7 49.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-220   TYR-221  7.7 7.6 -0.1 -1.0 20.8 20.7 49.5
 ALA-220   TYR-221  7.7 7.6 -0.1 -1.0 20.8 20.7 49.5
 TYR-221   ILE-222  9.8 9.8 -0.9 0.1 87.1 87.9 -25.6
 ILE-222   TRP-223  13.3 13.2 9.5 -15.2 81.3 81.1 45.3
 TRP-223   GLU-224  14.3 14.2 -0.3 -5.2 75.3 80.2 -65.9
 TRP-223   GLU-224  14.3 14.2 -0.3 -5.2 75.3 80.2 -65.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-223   GLU-224  14.3 14.2 -0.3 -5.2 75.3 80.2 -65.9
 TRP-223   GLU-224  14.3 14.2 -0.3 -5.2 75.3 80.2 -65.9
 GLU-224   ILE-225  14.0 13.6 -1.9 3.7 139.4 140.1 50.8
 ILE-225   ASN-226  14.2 13.8 -1.2 -11.4 91.1 91.1 -7.3
 ASN-226   THR-227  17.8 17.4 17.2 -18.6 94.9 108.9 -15.9
 THR-227   GLU-228  18.6 18.4 -9.5 15.4 150.8 149.2 223.1
 GLU-228   GLU-229  21.4 21.3 -8.8 16.1 119.9 115.9 -28.5
 GLU-229   GLU-230  21.1 21.1 6.2 -13.5 107.0 98.9 -65.6
 GLU-230   GLY-231  17.7 17.7 -6.8 1.9 99.1 100.2 -32.0
 GLY-231   THR-232  17.8 17.8 -5.2 1.6 82.6 83.5 99.7
 THR-232   PRO-233  21.3 21.3 -4.0 3.1 59.8 61.0 -30.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-276   ILE-277  5.4 5.4 3.8 -4.5 74.1 75.8 -110.5
 ILE-277   PHE-278  1.9 2.0 -4.3 9.3 71.4 73.0 47.2
 PHE-278   THR-279  1.7 1.7 3.4 14.9 41.0 40.9 495.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-297   TYR-298  10.1 10.1 -2.1 -0.6 102.7 97.8 -20.2
 TYR-298   ASN-299  7.7 7.7 -2.3 -1.5 41.5 39.9 8.5
 ASN-299   LEU-300  5.1 5.1 -3.9 2.3 38.0 33.0 27.6
 LEU-300   ASP-301  7.7 7.4 -6.3 1.1 98.1 93.0 96.9
 ASP-301   LYS-302  10.1 10.1 5.2 -1.8 91.8 88.5 17.7
 LYS-302   ILE-303  8.4 8.4 -2.9 6.6 25.4 30.7 -71.6
 ILE-303   ALA-304  7.0 6.7 -3.1 2.2 51.8 49.9 24.9
 ALA-304   GLU-305  10.1 9.7 -3.9 7.1 105.4 103.7 92.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees