Cag-Alpha

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-133   ILE-134  20.5 20.5 -24.2 -2.4 163.7 162.5 -505.2
 ILE-134   PRO-135  19.5 19.9 -11.4 6.4 90.7 98.6 -53.8
 PRO-135   SER-136  16.6 16.5 39.8 -67.4 49.8 56.1 -123.8
 SER-136   LYS-137  13.2 13.9 46.0 -26.8 16.3 38.7 243.6
 LYS-137   THR-138  14.1 13.4 37.9 -15.1 50.9 51.0 372.7
 THR-138   THR-139  11.5 10.6 18.8 -24.0 98.7 111.1 104.5
 THR-139   TYR-140  7.9 6.9 -67.9 83.4 101.3 101.0 -21.5
 TYR-140   PRO-141  5.7 5.8 23.1 -20.2 86.6 81.4 -29.7
 PRO-141   HIS-142  2.6 3.1 -16.1 12.3 41.4 39.7 -15.4
 HIS-142   SER-143  3.1 3.1 0.2 -9.8 82.3 85.7 -24.5
 SER-143   PHE-144  6.5 6.6 11.5 -8.5 109.4 104.9 65.2
 PHE-144   PHE-145  7.7 7.9 6.5 -2.5 163.3 164.8 -100.8
 PHE-145   GLU-146  7.2 7.3 -5.0 2.5 79.2 77.0 -35.8

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees