Spike Glycoprotein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-325
ILE-326
9.3
11.5
14.2
3.5
29.3
31.8
27.0
ILE-326
VAL-327
10.3
12.4
16.7
4.4
49.0
47.2
39.5
VAL-327
ARG-328
8.2
10.6
-10.8
0.3
150.8
152.6
-11.1
LEU-335
CYS-336
6.8
6.5
-34.0
13.1
152.0
139.5
-30.4
CYS-336
PRO-337
5.9
5.3
-23.3
-0.2
102.3
106.1
5.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-524
CYS-525
2.3
2.5
20.0
5.6
14.4
12.3
32.1
CYS-525
GLY-526
1.1
1.5
7.8
9.9
77.7
76.9
25.4
GLY-526
PRO-527
2.4
1.9
33.6
4.4
55.7
74.2
32.8
PRO-527
LYS-528
4.1
4.4
9.4
34.7
11.8
28.2
88.8
LYS-528
LYS-529
4.9
5.6
-16.4
-31.5
95.5
115.3
-23.4
LYS-529
SER-530
8.4
7.8
-44.3
4.4
109.3
126.6
-30.4
SER-530
THR-531
9.3
10.2
-1.7
0.3
129.6
130.1
-1.4
THR-531
ASN-532
12.0
12.6
32.6
-13.9
106.2
90.2
2.2
ASN-532
LEU-533
15.4
16.2
12.7
-12.3
47.3
57.5
10.4
LEU-533
VAL-534
15.8
17.6
-13.8
-9.1
128.2
134.9
-28.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees