Lysr-Type Regulatory Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-90   GLY-91  4.5 4.7 7.8 6.9 47.4 51.2 64.7
 GLY-91   GLU-92  2.3 2.2 -21.6 17.8 67.1 69.0 47.1
 GLU-92   LEU-93  2.1 2.2 6.4 -2.7 106.7 111.5 14.4

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees