Tarm

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-46   TYR-47  9.2 9.1 1.1 -0.2 104.7 104.0 24.6
 TYR-47   ASP-48  6.2 6.1 -0.1 1.5 28.3 27.9 -43.8
 ASP-48   GLU-49  4.3 4.3 -0.5 -0.1 36.8 36.9 17.7
 GLU-49   ILE-50  7.4 7.3 0.5 -0.5 98.6 97.6 -5.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-68   VAL-69  3.5 3.5 0.7 -0.4 35.2 34.7 12.2
 VAL-69   PHE-70  2.7 2.6 -0.6 -0.3 94.5 94.3 4.4
 PHE-70   GLU-71  1.8 1.8 0.1 -0.6 128.4 128.8 33.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-192   VAL-193  4.5 4.6 3.5 2.0 34.3 35.3 43.5
 VAL-193   LEU-194  4.3 4.4 -9.7 1.2 70.3 75.5 171.0
 LEU-194   VAL-195  8.1 8.2 16.7 -21.6 74.0 70.1 -75.1
 VAL-195   ASN-196  9.2 9.2 26.4 -24.7 125.0 121.8 7.0
 ASN-196   LYS-197  8.4 8.6 2.4 0.7 13.1 14.7 21.8
 ASN-196   LYS-197  8.4 8.6 2.4 0.7 13.1 14.7 21.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-196   LYS-197  8.4 8.6 2.4 0.7 13.1 14.7 21.8
 ASN-196   LYS-197  8.4 8.6 2.4 0.7 13.1 14.7 21.8
 LYS-197   LYS-198  8.1 8.4 -4.2 5.4 122.5 120.3 22.3
 LYS-198   GLU-199  4.6 4.9 -2.0 1.4 85.8 86.4 -5.7
 GLU-199   PHE-200  1.7 1.9 1.3 1.1 94.4 95.4 -25.5
 PHE-200   LYS-201  2.3 2.0 4.5 -2.2 69.9 68.4 -11.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-202   ASN-203  7.2 7.3 7.0 -10.9 148.0 150.4 86.3
 ASN-203   LEU-204  7.4 7.3 -4.0 5.3 91.0 87.9 69.7
 LEU-204   ALA-205  9.5 9.3 -2.0 5.8 108.0 108.8 126.3
 ALA-205   LEU-206  7.0 6.9 5.7 -7.0 48.7 50.8 35.1
 ALA-205   LEU-206  7.0 6.9 5.7 -7.0 48.7 50.8 35.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-205   LEU-206  7.0 6.9 5.7 -7.0 48.7 50.8 35.1
 ALA-205   LEU-206  7.0 6.9 5.7 -7.0 48.7 50.8 35.1
 LEU-206   CYS-207  4.4 4.4 -4.8 12.9 140.9 140.6 116.6
 CYS-207   VAL-208  6.9 6.9 -4.7 -0.8 78.5 77.9 -49.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees