DNA Polymerase IV
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-147
LYS-148
2.6
2.6
-2.7
-1.6
82.0
80.7
38.9
LYS-148
VAL-149
1.2
1.2
-4.7
3.5
40.2
37.4
2.0
VAL-149
PHE-150
3.5
3.5
8.7
-3.1
153.9
153.5
-64.1
PHE-150
ALA-151
1.3
1.2
1.8
-5.5
94.2
94.6
0.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-168
GLU-169
9.0
8.9
-2.7
-7.4
36.3
43.0
80.8
GLU-169
GLU-170
9.4
9.4
8.3
2.9
106.7
109.9
8.0
GLU-170
VAL-171
5.6
5.7
-1.6
-2.5
130.5
129.3
5.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-231
GLU-232
10.8
10.7
0.4
9.8
158.6
161.3
-100.0
GLU-232
TYR-233
11.0
11.3
20.6
-21.4
126.4
122.9
-68.1
TYR-233
ASN-234
7.9
7.9
-7.3
-14.3
71.5
77.6
433.1
ASN-234
GLU-235
6.0
5.7
27.5
-23.1
145.8
164.7
-83.0
GLU-235
PRO-236
3.9
4.3
19.1
-1.1
101.8
100.2
-165.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees