Glutaconyl-Coa Decarboxylase A Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-488   THR-489  6.4 6.6 6.4 2.3 11.9 16.4 94.0
 THR-489   ALA-490  7.0 7.3 -4.9 0.3 119.9 119.9 -32.7
 ALA-490   ALA-491  3.4 3.6 1.7 0.6 82.0 82.9 8.6
 ALA-491   THR-492  3.9 4.1 0.3 -5.5 40.8 39.2 -55.2
 THR-492   ALA-493  6.8 6.9 11.2 -6.8 26.5 27.5 63.4
 ALA-493   MET-494  4.7 4.8 -1.6 1.9 105.1 105.7 2.1
 MET-494   TYR-495  3.0 3.0 -3.8 3.7 101.4 102.6 -17.8
 TYR-495   SER-496  6.8 6.8 -20.2 13.1 116.9 117.6 -54.2
 SER-496   ARG-497  8.4 8.7 -5.7 17.7 140.1 145.0 109.8
 ARG-497   ARG-498  8.7 8.6 -6.2 0.9 76.3 79.2 -13.9
 ARG-498   LEU-499  10.6 10.6 -7.9 8.3 69.1 69.8 -13.4
 LEU-499   ALA-500  12.7 12.8 7.1 -2.5 42.8 42.4 27.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-518   LEU-519  6.2 6.1 -5.8 5.8 71.9 73.0 -11.3
 LEU-519   ILE-520  3.3 3.1 2.3 -1.8 59.6 60.8 -1.2
 ILE-520   GLN-521  2.7 3.0 3.1 -0.7 24.9 23.2 27.4
 GLN-521   ALA-522  2.3 2.4 -2.0 1.1 88.9 89.4 1.6
 ALA-522   PHE-523  2.9 2.5 1.0 -2.9 96.9 97.0 0.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees