Dengue 4 Ns3 Full-Length Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-168   GLU-169  6.2 5.8 -31.8 -14.0 78.8 84.0 -215.0
 GLU-169   ARG-170  7.7 8.5 -144.5 -59.3 41.5 20.5 127.2
 ARG-170   ILE-171  6.8 7.4 37.3 52.7 156.2 103.9 -49.0
 ILE-171   GLY-172  5.3 6.3 173.1 153.8 121.4 115.5 -10.7
 GLY-172   GLU-173  6.2 3.5 161.8 -19.4 131.3 83.0 -56.3
 GLU-173   PRO-174  5.5 3.6 3.4 7.4 70.9 124.9 14.8
 PRO-174   ASP-175  2.5 2.6 -27.6 120.3 18.4 71.9 70.9
 ASP-175   TYR-176  1.7 5.8 -9.6 49.7 94.2 21.5 33.5
 TYR-176   GLU-177  4.4 6.2 -12.2 -130.2 56.1 71.5 -72.9
 GLU-177   VAL-178  6.6 9.4 -73.5 33.4 101.6 15.8 91.2
 VAL-178   ASP-179  9.1 9.2 -59.7 -0.5 27.6 63.8 28.2
 ASP-179   GLU-180  8.6 10.1 -18.1 1.3 70.3 27.4 7.4
 GLU-180   ASP-181  9.9 12.4 -167.9 -4.4 31.0 32.8 -122.3
 ASP-181   ILE-182  11.8 12.0 -88.1 21.0 43.2 61.8 26.8
 ILE-182   PHE-183  8.7 8.4 -29.7 -5.1 36.9 45.8 15.6

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees