Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-106
THR-107
8.4
8.2
-4.3
18.2
141.6
133.2
31.1
THR-107
LEU-108
6.8
6.0
13.2
0.7
110.7
118.0
-33.3
LEU-108
GLY-109
3.7
2.6
-2.1
9.5
137.0
135.3
11.9
GLY-109
ILE-110
2.5
2.2
-66.5
42.5
60.2
68.8
41.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-210
ILE-211
7.8
7.4
-6.1
21.5
25.1
27.1
-37.3
ILE-211
ASP-212
7.2
7.7
-173.9
146.9
72.8
45.5
1.2
ASP-212
SER-213
4.2
4.4
137.8
-98.9
71.6
63.5
72.8
SER-213
LYS-214
3.9
3.0
-14.9
21.8
81.8
77.9
18.6
LYS-214
GLY-215
3.1
2.6
16.2
-3.6
39.4
43.9
30.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-249
TRP-250
9.5
10.0
-1.9
1.4
86.3
89.5
11.9
TRP-250
TRP-251
7.1
7.5
7.3
-9.7
81.7
83.4
-0.5
TRP-251
ARG-252
4.1
4.5
91.4
-98.0
143.3
145.4
50.8
ARG-252
GLY-253
5.1
3.7
-8.8
-83.2
50.9
59.3
164.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees