N-Methyl-D-Aspartate Receptor Subunit 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-141
LYS-142
15.6
15.5
2.5
-12.4
58.0
58.7
-23.3
LYS-142
TYR-143
12.1
12.0
-3.0
36.6
45.8
47.8
-77.3
TYR-143
GLN-144
10.1
9.3
24.9
25.9
63.4
75.7
82.0
GLN-144
GLY-145
6.3
5.9
-67.3
13.0
45.9
70.8
113.5
GLY-145
LEU-146
3.0
2.6
-33.4
14.3
109.2
118.7
-21.5
LEU-146
THR-147
0.8
1.4
10.0
6.7
63.0
59.3
3.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-238
VAL-239
7.7
8.1
19.6
-19.0
67.6
73.7
-0.1
VAL-239
THR-240
7.3
7.4
-6.8
14.0
167.9
173.4
31.8
THR-240
THR-241
6.4
6.6
-17.9
-51.1
114.7
110.5
-111.3
THR-241
GLY-242
8.8
9.6
126.3
-5.0
72.7
19.6
337.1
GLY-242
GLU-243
8.7
10.6
-61.3
-16.1
136.1
110.1
-189.0
GLU-243
LEU-244
8.5
9.6
2.2
8.6
61.4
73.8
0.2
LEU-244
PHE-245
5.3
6.1
6.6
-38.4
23.3
11.3
-113.4
PHE-245
PHE-246
5.3
4.9
162.5
-144.6
44.7
68.6
29.2
PHE-246
ARG-247
2.7
2.2
-84.0
34.6
59.6
66.2
103.3
ARG-247
SER-248
4.6
4.3
7.5
10.1
67.9
56.9
59.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees