Sialyltransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-220   SER-221  7.8 7.7 22.1 -52.9 148.7 152.0 90.6
 SER-221   ASP-222  5.8 6.3 33.9 -4.2 84.7 83.5 16.9
 ASP-222   GLU-223  5.6 5.5 11.3 0.9 79.7 79.1 -0.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-303   ILE-304  6.3 6.3 -10.0 7.4 99.8 100.4 16.1
 ILE-304   PRO-305  3.7 3.6 -19.0 25.8 100.3 94.9 26.4
 PRO-305   ALA-306  6.2 6.6 -40.0 7.6 53.9 43.8 78.0
 ALA-306   ASN-307  9.2 9.1 2.6 -8.5 85.4 90.7 7.0
 ASN-307   ILE-308  9.3 10.7 16.2 7.9 122.2 97.0 -40.0
 ILE-308   SER-309  6.7 8.2 -7.3 52.6 17.5 7.8 -144.7
 SER-309   PHE-310  7.6 9.2 -42.2 9.4 58.1 71.6 1.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-343   PHE-344  9.0 8.4 14.4 -6.2 86.8 93.3 -16.6
 PHE-344   THR-345  11.4 10.9 39.5 -49.1 84.3 82.9 -1.2
 THR-345   SER-346  14.8 14.7 7.6 -85.6 125.0 130.5 180.9
 SER-346   ASN-347  17.8 17.6 28.4 64.1 61.4 84.7 83.8
 ASN-347   LYS-348  19.4 21.3 133.0 -9.3 141.4 146.4 -421.0
 LYS-348   LYS-349  21.9 21.2 168.6 15.7 140.8 86.4 659.5
 LYS-349   ILE-350  19.2 20.8 170.0 14.7 116.3 135.2 -324.8
 ILE-350   LYS-351  16.7 17.5 -1.7 15.0 93.6 64.2 -41.9
 LYS-351   ASN-352  18.3 18.3 -13.7 12.3 71.1 61.1 -20.6
 ASN-352   LYS-353  15.4 15.0 -0.8 -2.6 87.4 100.8 16.0
 LYS-353   GLU-354  11.7 11.4 14.4 -21.7 128.4 107.2 -11.5
 GLU-354   ASP-355  11.7 12.7 16.3 -2.8 60.4 47.9 20.2
 ASP-355   ALA-356  13.7 15.2 -5.9 2.6 133.8 132.7 -25.1
 ALA-356   LEU-357  11.0 12.2 -8.4 8.3 68.8 80.3 -11.3
 LEU-357   ASN-358  8.6 10.7 -6.2 7.2 73.4 93.0 -12.4
 ASN-358   ASP-359  11.8 14.3 6.4 -15.6 36.9 17.6 -24.0
 ASP-359   PRO-360  12.7 14.2 -5.4 -20.7 86.7 101.2 -23.7
 PRO-360   TYR-361  13.7 14.6 21.9 0.7 64.5 47.6 18.3
 TYR-361   VAL-362  11.5 12.2 -22.0 21.4 70.3 62.5 2.5
 VAL-362   ARG-363  8.4 9.6 0.1 -11.1 148.7 123.6 21.6
 ARG-363   VAL-364  9.3 10.6 -0.3 16.3 101.4 121.9 -1.1
 VAL-364   MET-365  10.5 11.2 -7.0 -13.1 108.7 99.1 -2.1
 MET-365   LEU-366  7.5 7.6 10.0 -0.1 137.8 141.1 -13.3
 LEU-366   ARG-367  5.4 6.4 5.0 -2.7 124.0 102.1 -8.7
 ARG-367   LEU-368  8.4 9.6 1.9 -5.6 66.6 58.6 -5.8
 LEU-368   GLY-369  9.8 9.4 -3.7 -1.7 102.1 88.8 -5.2
 GLY-369   MET-370  7.0 6.2 -1.1 -1.5 165.2 151.0 -15.2
 MET-370   ILE-371  6.2 4.5 10.7 7.4 87.2 102.6 -3.0
 ILE-371   ASP-372  2.7 1.6 -2.1 1.5 13.2 11.3 4.7
 ASP-372   LYS-373  1.3 0.5 8.4 -12.7 85.3 107.3 -15.0
 LYS-373   SER-374  2.7 3.3 13.8 -25.1 65.9 86.2 15.5
 SER-374   GLN-375  5.4 5.3 17.9 -45.2 14.4 37.6 -68.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees