DNA Polymerase IV (Family Y)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-234
GLU-235
10.9
10.2
76.1
-74.3
124.1
142.4
20.2
ASN-234
GLU-235
18.6
19.8
76.1
-74.3
70.5
51.9
-0.7
GLU-235
PRO-236
15.4
16.3
-6.8
-13.2
47.8
46.5
7.8
ASN-234
GLU-235
10.9
10.2
76.1
-74.3
124.1
142.4
20.2
ASN-234
GLU-235
18.6
19.8
76.1
-74.3
70.5
51.9
-0.7
GLU-235
PRO-236
15.4
16.3
-6.8
-13.2
47.8
46.5
7.8
PRO-236
ILE-237
12.6
13.7
2.4
14.7
84.1
82.3
2.4
ILE-237
ARG-238
9.7
10.5
19.2
12.6
86.8
78.8
14.0
ARG-238
THR-239
6.5
7.8
6.8
19.5
36.8
71.5
11.6
THR-239
ARG-240
3.7
4.2
0.5
40.7
41.5
12.5
31.1
ARG-240
VAL-241
3.9
3.8
33.0
-175.3
40.9
67.8
-82.7
VAL-241
ARG-242
2.0
1.4
74.6
72.4
22.0
28.6
106.1
ARG-242
LYS-243
2.3
1.3
20.1
-17.5
49.9
36.7
2.4
LYS-243
SER-244
1.5
1.2
2.2
-4.5
32.7
36.0
0.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees