Chlorella Virus DNA Ligase-Adenylate

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-185   LYS-186  5.0 4.9 1.6 -1.1 48.2 53.9 2.6
 LYS-186   MET-187  4.9 5.2 13.3 -4.5 47.0 44.6 1.1
 MET-187   LYS-188  1.9 2.7 -25.9 15.8 140.5 139.1 -0.3
 LYS-188   GLN-189  2.1 4.3 62.6 -9.9 57.4 33.6 26.6
 GLN-189   PHE-190  1.6 2.9 134.6 -19.2 33.5 41.8 79.7
 PHE-190   LYS-191  3.4 4.4 8.5 -11.7 37.9 31.3 -7.8

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees