Carbamoyl Phosphate Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-679   HIS-680  9.5 9.5 5.1 -1.4 149.7 147.0 19.0
 HIS-680   ALA-681  11.3 11.4 5.8 -16.9 85.8 84.5 -42.5
 ALA-681   VAL-682  13.9 14.0 -9.5 16.3 98.0 101.9 16.5
 VAL-682   GLU-683  11.7 12.1 1.0 7.7 149.6 141.5 -69.5
 GLU-683   ARG-684  10.1 10.4 -11.3 1.9 53.4 58.2 80.5
 ARG-684   LEU-685  13.3 13.6 3.5 -2.6 75.3 66.8 -15.9
 LEU-685   LYS-686  15.0 15.3 -4.4 -11.1 86.7 91.5 -12.8
 LYS-686   LEU-687  12.9 13.2 25.2 -20.6 26.5 24.1 29.2
 LEU-687   LYS-688  12.3 12.5 -6.8 24.5 101.1 101.9 2.5
 LYS-688   GLN-689  9.6 9.9 -1.4 -4.5 135.7 118.5 -33.4
 GLN-689   PRO-690  6.6 6.6 -31.1 19.2 88.0 94.3 -15.2
 PRO-690   ALA-691  3.5 3.3 -39.3 26.8 39.1 45.2 60.8
 ALA-691   ASN-692  1.2 1.3 5.8 12.8 70.2 77.7 34.9
 ASN-692   ALA-693  2.5 2.5 -21.3 14.5 37.4 44.3 36.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-714   ARG-715  8.2 7.8 -21.8 44.4 74.1 71.5 -37.7
 ARG-715   PRO-716  9.2 9.1 44.0 -37.8 61.7 64.7 7.0
 ALA-724   MET-725  13.3 12.4 128.2 -63.1 62.8 61.3 138.4
 MET-725   GLU-726  9.7 8.7 -11.0 14.6 65.6 67.5 -23.6
 GLU-726   ILE-727  8.2 7.9 12.7 -29.0 55.4 56.3 -34.4
 ILE-727   VAL-728  6.3 6.4 6.3 -3.7 78.8 85.3 -19.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-752   ASP-753  6.6 6.1 21.9 -25.5 84.4 86.8 39.4
 ASP-753   HIS-754  2.9 2.5 10.4 -8.8 111.2 114.1 -22.8
 HIS-754   PHE-755  2.3 2.6 7.8 -25.9 146.9 149.6 83.7
 PHE-755   LEU-756  2.6 2.7 -10.3 13.4 92.1 84.4 11.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees