Igg Antibody (Light Chain)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-104   GLU-105  6.6 6.7 -5.1 -2.9 90.9 87.1 21.7
 GLU-105   ILE-106  3.2 3.3 -30.3 12.2 18.1 13.1 146.6
 ILE-106   LYS-107  3.0 3.4 -5.1 3.5 52.5 60.1 4.0

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees