Pyruvate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-88   ILE-89  4.3 3.6 -7.3 9.8 71.4 67.2 10.9
 ILE-89   ARG-90  0.6 0.5 15.7 -16.9 79.1 80.4 -2.1
 ARG-90   THR-91  4.0 3.6 -4.5 -3.2 78.8 74.8 31.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-125   ILE-126  10.1 10.0 23.8 -25.7 122.4 115.2 7.7
 ILE-126   ASP-127  6.7 6.6 5.2 29.0 41.6 40.6 97.2
 ASP-127   TYR-128  4.0 3.5 -55.0 31.7 88.8 99.8 -38.0
 TYR-128   GLN-129  4.3 5.3 -2.5 -11.1 66.9 61.3 59.2
 TYR-128   GLN-129  4.3 5.3 -2.5 -11.1 66.9 61.3 59.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-128   GLN-129  4.3 5.3 -2.5 -11.1 66.9 61.3 59.2
 TYR-128   GLN-129  4.3 5.3 -2.5 -11.1 66.9 61.3 59.2
 GLN-129   ASN-130  7.0 7.7 -2.7 -5.5 113.4 105.0 3.2
 ASN-130   LEU-131  9.6 10.3 2.0 -8.8 25.7 11.8 -26.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-175   GLY-176  8.1 7.7 27.2 -7.8 83.0 90.1 -21.4
 GLY-176   VAL-177  4.9 4.2 2.2 4.6 113.2 112.8 -24.8
 VAL-177   ASN-178  2.3 2.7 -48.7 36.8 75.4 67.4 15.0
 ASN-178   LEU-179  1.1 1.4 -20.7 14.2 76.2 71.4 21.4
 LEU-179   PRO-180  4.9 5.2 -2.4 1.4 62.9 60.3 23.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees