Uracil-Dna Glycosylase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-156
CYS-157
8.6
8.8
14.1
-13.6
82.8
85.9
61.3
CYS-157
PHE-158
9.5
9.6
16.6
-2.3
37.7
40.6
120.5
PHE-158
SER-159
10.2
10.0
-10.9
-1.4
146.2
148.8
-106.6
SER-159
VAL-160
8.4
8.4
-2.4
4.2
124.2
122.4
-23.0
VAL-160
GLN-161
10.3
10.4
8.5
-9.8
54.2
49.3
-62.7
GLN-161
ARG-162
9.8
9.9
1.4
5.5
14.7
20.0
77.1
ARG-162
PRO-163
9.2
9.7
1.9
1.1
72.4
76.4
44.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-193
GLY-194
4.4
4.3
-5.7
-3.9
94.8
97.8
-30.9
GLY-194
TRP-195
2.9
3.1
8.1
-2.7
30.5
31.0
29.6
TRP-195
ALA-196
1.3
1.5
5.0
-5.1
42.0
42.1
23.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-233
ASN-234
2.8
3.0
2.9
2.4
127.8
127.4
-41.9
ASN-234
GLN-235
0.7
0.9
3.3
-14.7
138.6
137.4
66.4
GLN-235
ASN-236
2.2
2.2
5.8
-0.5
76.8
76.9
24.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-244
TRP-245
11.1
11.3
-4.8
-5.9
51.9
57.6
54.1
TRP-245
GLY-246
13.4
13.8
5.1
-1.3
82.5
83.0
22.0
GLY-246
SER-247
16.8
17.0
9.6
-7.6
15.5
19.2
45.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-248
ALA-249
17.2
16.9
-5.1
-1.3
78.4
75.6
38.9
ALA-249
GLN-250
13.5
13.3
-1.7
-2.7
36.5
37.7
33.9
GLN-250
LYS-251
14.4
14.3
-22.7
-3.8
24.7
28.9
229.7
LYS-251
LYS-252
15.0
15.3
-24.6
14.2
64.1
78.8
51.8
LYS-252
GLY-253
11.2
12.5
-16.3
-43.8
63.9
73.5
158.8
GLY-253
SER-254
11.2
10.0
50.5
-3.3
167.7
144.0
-436.0
SER-254
ALA-255
11.4
11.8
6.1
-11.7
104.8
138.9
-4.2
ALA-255
ILE-256
8.2
8.9
9.1
36.5
81.3
80.2
95.0
ILE-256
ASP-257
6.3
6.5
0.7
-1.1
129.0
128.0
-15.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees