Class I Histocompatibility Antigen (Hla-A2.1) (Alpha Chain)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-179   GLN-180  7.5 8.1 -85.3 120.1 127.8 104.2 138.0
 GLN-180   ARG-181  6.6 6.0 -97.6 122.5 74.2 60.3 -82.7
 ARG-181   THR-182  8.4 8.2 -31.7 13.7 37.1 62.6 69.8
 THR-182   ASP-183  7.4 6.9 6.4 -19.2 119.6 121.0 41.6
 ASP-183   ALA-184  9.7 9.0 28.2 -22.3 109.0 103.3 -31.6

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees